miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|151532460|gb|EV391103.1|EV391103 GGGGGGAGTGTGTTGGGTGAACTTCGAGGCCCTGATCATCGCCATGGCAGTGTTAGGCGGGACTATCATCATCAGCATCA
CAGTCTGTTGCTGCTGCTGCTGTTGCTGCAAGAAACGTCAATCAAGGCCAGACAGAGATGAGGAGAGGTTTGCCAGGAGG
AAAGAGGAGATCAGACAGCGTGCTGATGAACGGAAGGTGGAGAGGAAGGTGAGGCATGATGACATCCGCAAGAAGTATGG
TCTTGTCCCTGACTCTGACCACCCATACAGCAAGTTTGAAAATGAGTAAAGCAGAAACCTTTGTGAGAGTGAGGAGAAGT
TGTTCAGATGGCCCGGCTCTACTCTGCTCCATCCTGTTTGGACTGACTATCAATCATCCTGTCCTGCTGACTGTTTTAGC
TTAGAGAGCAGAGACAGCCTACTCTGAGAGACACACAAACACCTATATATCAAGACTGATTTATCATCATGATTCATCTA
AATCAAACCTTTTGCCTATAATTATTAAATGCAGTTTTTATTAATTCATTTTAGGTTTTGAATGAAAATGATTTACAGTT
TGAGAAAATGTTAAGTTTGTCACACGATTAAGAAGTTTGAGGAAGTCTGTAATATTTACTTTGCTGTTGGAGACATGGCA
CTGAGTGGAGCTTCTCAACTTTCTGCACATTCTTTGTATTTTTGAAATCTGATTTAAAGAGCCTTTGTTTTAAATTACTG
TAATATCTGTGAGTACGTTTGCGCTTTGTATATATTTCATAAACCAAGAACATAATCTGCTAAATCGGATACATTTCCTA
ATAAAATTTTACTTTTAATGC




Most similar to sp|Q5NVI6|PTTG_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5NVI6|PTTG_PONAB Pituitary tumor-transforming gene 1
           protein-interacting protein OS=Pongo abelii GN=PTTG1IP
           PE=2 SV=2
          Length = 180

 Score =  102 bits (254), Expect = 3e-21
 Identities = 49/93 (52%), Positives = 67/93 (72%)
 Frame = +2

Query: 5   GVCWVNFEALIIAMAVLGGTIIISITVXXXXXXXXKKRQSRPDRDEERFARRKEEIRQRA 184
           GVCWVNFEALII M+V+GGT+++ I +        +KR  +PDR EE+  R +EE R R 
Sbjct: 89  GVCWVNFEALIITMSVVGGTLLLGIAICCCCCCR-RKRSRKPDRSEEKAMREREERRIRQ 147

Query: 185 DERKVERKVRHDDIRKKYGLVPDSDHPYSKFEN 283
           +ER+ E K RHD+IRKKYGL  + ++PY++FEN
Sbjct: 148 EERRAEMKTRHDEIRKKYGLFKE-ENPYARFEN 179